| Final | time |   | L | Y | 50m | Pts |  | 1. Chanelle van Wyk |  RSA | 1:02.32 | CR | - | 89 | 29.87s | 906 |  | 2. Jessica Nrashley Cooper |  RSA | 1:04.15 |   | - | 92 | 30.87s | 831 |  | 3. Engi El Shazli |  EGY | 1:07.42 |   | - | 93 | 33.06s | 715 |  | 4. Imane Boulaamane |  MAR | 1:08.39 |   | - | 89 | 33.06s | 685 |  | 5. Nour Abou Elazm |  EGY | 1:10.15 |   | - | 90 | 33.67s | 635 |  | 6. Talisa Lanoe |  KEN | 1:11.30 |   | - | 94 | 35.35s | 605 |  | 7. Sylvia Brunlehner |  KEN | 1:13.26 |   | - | 94 | 35.38s | 558 |  | 8. Raissa Dosso |  CIV | 1:39.32 |   | - | 95 | 45.33s | 223 |   
| African Record: Kirsty Coventry (ZIM), 58.77s, 12/08/2008, Beijing. |  | Championship Record: Atmann Romy (RSA), 1:04.51, 14/08/2002, Cairo. |   
 | 
 |